537 lines
No EOL
22 KiB
C#
537 lines
No EOL
22 KiB
C#
namespace my.utils {
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using System;
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using System.Collections;
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using System.Text;
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using System.Text.RegularExpressions;
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/// <summary>
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/// This Class implements the Difference Algorithm published in
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/// "An O(ND) Difference Algorithm and its Variations" by Eugene Myers
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/// Algorithmica Vol. 1 No. 2, 1986, p 251.
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///
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/// There are many C, Java, Lisp implementations public available but they all seem to come
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/// from the same source (diffutils) that is under the (unfree) GNU public License
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/// and cannot be reused as a sourcecode for a commercial application.
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/// There are very old C implementations that use other (worse) algorithms.
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/// Microsoft also published sourcecode of a diff-tool (windiff) that uses some tree data.
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/// Also, a direct transfer from a C source to C# is not easy because there is a lot of pointer
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/// arithmetic in the typical C solutions and i need a managed solution.
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/// These are the reasons why I implemented the original published algorithm from the scratch and
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/// make it avaliable without the GNU license limitations.
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/// I do not need a high performance diff tool because it is used only sometimes.
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/// I will do some performace tweaking when needed.
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///
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/// The algorithm itself is comparing 2 arrays of numbers so when comparing 2 text documents
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/// each line is converted into a (hash) number. See DiffText().
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///
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/// Some chages to the original algorithm:
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/// The original algorithm was described using a recursive approach and comparing zero indexed arrays.
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/// Extracting sub-arrays and rejoining them is very performance and memory intensive so the same
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/// (readonly) data arrays are passed arround together with their lower and upper bounds.
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/// This circumstance makes the LCS and SMS functions more complicate.
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/// I added some code to the LCS function to get a fast response on sub-arrays that are identical,
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/// completely deleted or inserted.
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///
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/// The result from a comparisation is stored in 2 arrays that flag for modified (deleted or inserted)
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/// lines in the 2 data arrays. These bits are then analysed to produce a array of Item objects.
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///
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/// Further possible optimizations:
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/// (first rule: don't do it; second: don't do it yet)
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/// The arrays DataA and DataB are passed as parameters, but are never changed after the creation
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/// so they can be members of the class to avoid the paramter overhead.
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/// In SMS is a lot of boundary arithmetic in the for-D and for-k loops that can be done by increment
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/// and decrement of local variables.
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/// The DownVector and UpVector arrays are alywas created and destroyed each time the SMS gets called.
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/// It is possible to reuse tehm when transfering them to members of the class.
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/// See TODO: hints.
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///
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/// diff.cs: A port of the algorythm to C#
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/// Created by Matthias Hertel, see http://www.mathertel.de
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/// This work is licensed under a Creative Commons Attribution 2.0 Germany License.
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/// see http://creativecommons.org/licenses/by/2.0/de/
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///
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/// Changes:
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/// 2002.09.20 There was a "hang" in some situations.
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/// Now I undestand a little bit more of the SMS algorithm.
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/// There have been overlapping boxes; that where analyzed partial differently.
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/// One return-point is enough.
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/// A assertion was added in CreateDiffs when in debug-mode, that counts the number of equal (no modified) lines in both arrays.
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/// They must be identical.
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///
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/// 2003.02.07 Out of bounds error in the Up/Down vector arrays in some situations.
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/// The two vetors are now accessed using different offsets that are adjusted using the start k-Line.
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/// A test case is added.
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///
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/// 2006.03.05 Some documentation and a direct Diff entry point.
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///
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/// 2006.03.08 Refactored the API to static methods on the Diff class to make usage simpler.
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/// 2006.03.10 using the standard Debug class for self-test now.
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/// compile with: csc /target:exe /out:diffTest.exe /d:DEBUG /d:TRACE /d:SELFTEST Diff.cs
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/// </summary>
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public class Diff {
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/// <summary>details of one difference.</summary>
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public struct Item {
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/// <summary>Start Line number in Data A.</summary>
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public int StartA;
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/// <summary>Start Line number in Data B.</summary>
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public int StartB;
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/// <summary>Number of changes in Data A.</summary>
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public int deletedA;
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/// <summary>Number of changes in Data A.</summary>
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public int insertedB;
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} // Item
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/// <summary>
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/// Shortest Middle Snake Return Data
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/// </summary>
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private struct SMSRD {
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internal int x, y;
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// internal int u, v; // 2002.09.20: no need for 2 points
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}
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#region self-Test
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#if (SELFTEST)
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/// <summary>
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/// start a self- / box-test for some diff cases and report to the debug output.
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/// </summary>
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/// <param name="args">not used</param>
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/// <returns>always 0</returns>
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public static int Main(string[] args) {
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StringBuilder ret = new StringBuilder();
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string a, b;
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System.Diagnostics.ConsoleTraceListener ctl = new System.Diagnostics.ConsoleTraceListener(false);
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System.Diagnostics.Debug.Listeners.Add(ctl);
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System.Console.WriteLine("Diff Self Test...");
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// test all changes
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a = "a,b,c,d,e,f,g,h,i,j,k,l".Replace(',', '\n');
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b = "0,1,2,3,4,5,6,7,8,9".Replace(',', '\n');
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System.Diagnostics.Debug.Assert(TestHelper(Diff.DiffText(a, b, false, false, false))
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== "12.10.0.0*",
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"all-changes test failed.");
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System.Diagnostics.Debug.WriteLine("all-changes test passed.");
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// test all same
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a = "a,b,c,d,e,f,g,h,i,j,k,l".Replace(',', '\n');
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b = a;
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System.Diagnostics.Debug.Assert(TestHelper(Diff.DiffText(a, b, false, false, false))
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== "",
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"all-same test failed.");
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System.Diagnostics.Debug.WriteLine("all-same test passed.");
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// test snake
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a = "a,b,c,d,e,f".Replace(',', '\n');
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b = "b,c,d,e,f,x".Replace(',', '\n');
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System.Diagnostics.Debug.Assert(TestHelper(Diff.DiffText(a, b, false, false, false))
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== "1.0.0.0*0.1.6.5*",
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"snake test failed.");
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System.Diagnostics.Debug.WriteLine("snake test passed.");
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// 2002.09.20 - repro
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a = "c1,a,c2,b,c,d,e,g,h,i,j,c3,k,l".Replace(',', '\n');
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b = "C1,a,C2,b,c,d,e,I1,e,g,h,i,j,C3,k,I2,l".Replace(',', '\n');
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System.Diagnostics.Debug.Assert(TestHelper(Diff.DiffText(a, b, false, false, false))
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== "1.1.0.0*1.1.2.2*0.2.7.7*1.1.11.13*0.1.13.15*",
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"repro20020920 test failed.");
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System.Diagnostics.Debug.WriteLine("repro20020920 test passed.");
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// 2003.02.07 - repro
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a = "F".Replace(',', '\n');
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b = "0,F,1,2,3,4,5,6,7".Replace(',', '\n');
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System.Diagnostics.Debug.Assert(TestHelper(Diff.DiffText(a, b, false, false, false))
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== "0.1.0.0*0.7.1.2*",
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"repro20030207 test failed.");
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System.Diagnostics.Debug.WriteLine("repro20030207 test passed.");
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// Muegel - repro
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a = "HELLO\nWORLD";
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b = "\n\nhello\n\n\n\nworld\n";
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System.Diagnostics.Debug.Assert(TestHelper(Diff.DiffText(a, b, false, false, false))
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== "2.8.0.0*",
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"repro20030409 test failed.");
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System.Diagnostics.Debug.WriteLine("repro20030409 test passed.");
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// test some differences
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a = "a,b,-,c,d,e,f,f".Replace(',', '\n');
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b = "a,b,x,c,e,f".Replace(',', '\n');
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System.Diagnostics.Debug.Assert(TestHelper(Diff.DiffText(a, b, false, false, false))
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== "1.1.2.2*1.0.4.4*1.0.6.5*",
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"some-changes test failed.");
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System.Diagnostics.Debug.WriteLine("some-changes test passed.");
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System.Diagnostics.Debug.WriteLine("End.");
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System.Diagnostics.Debug.Flush();
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return (0);
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}
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public static string TestHelper(Item []f) {
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StringBuilder ret = new StringBuilder();
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for (int n = 0; n < f.Length; n++) {
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ret.Append(f[n].deletedA.ToString() + "." + f[n].insertedB.ToString() + "." + f[n].StartA.ToString() + "." + f[n].StartB.ToString() + "*");
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}
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// Debug.Write(5, "TestHelper", ret.ToString());
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return (ret.ToString());
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}
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#endif
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#endregion
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/// <summary>
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/// Find the difference in 2 texts, comparing by textlines.
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/// </summary>
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/// <param name="TextA">A-version of the text (usualy the old one)</param>
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/// <param name="TextB">B-version of the text (usualy the new one)</param>
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/// <returns>Returns a array of Items that describe the differences.</returns>
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public Item [] DiffText(string TextA, string TextB) {
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return(DiffText(TextA, TextB, false, false, false));
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} // DiffText
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/// <summary>
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/// Find the difference in 2 text documents, comparing by textlines.
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/// The algorithm itself is comparing 2 arrays of numbers so when comparing 2 text documents
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/// each line is converted into a (hash) number. This hash-value is computed by storing all
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/// textlines into a common hashtable so i can find dublicates in there, and generating a
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/// new number each time a new textline is inserted.
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/// </summary>
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/// <param name="TextA">A-version of the text (usualy the old one)</param>
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/// <param name="TextB">B-version of the text (usualy the new one)</param>
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/// <param name="trimSpace">When set to true, all leading and trailing whitespace characters are stripped out before the comparation is done.</param>
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/// <param name="ignoreSpace">When set to true, all whitespace characters are converted to a single space character before the comparation is done.</param>
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/// <param name="ignoreCase">When set to true, all characters are converted to their lowercase equivivalence before the comparation is done.</param>
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/// <returns>Returns a array of Items that describe the differences.</returns>
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public static Item [] DiffText(string TextA, string TextB, bool trimSpace, bool ignoreSpace, bool ignoreCase) {
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// prepare the input-text and convert to comparable numbers.
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Hashtable h = new Hashtable(TextA.Length + TextB.Length);
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// The A-Version of the data (original data) to be compared.
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DiffData DataA = new DiffData(DiffCodes(TextA, h, trimSpace, ignoreSpace, ignoreCase));
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// The B-Version of the data (modified data) to be compared.
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DiffData DataB = new DiffData(DiffCodes(TextB, h, trimSpace, ignoreSpace, ignoreCase));
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h = null; // free up hashtable memory (maybe)
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LCS(DataA, 0, DataA.Length, DataB, 0, DataB.Length);
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return CreateDiffs(DataA, DataB);
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} // DiffText
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/// <summary>
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/// Find the difference in 2 arrays of integers.
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/// </summary>
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/// <param name="ArrayA">A-version of the numbers (usualy the old one)</param>
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/// <param name="ArrayB">B-version of the numbers (usualy the new one)</param>
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/// <returns>Returns a array of Items that describe the differences.</returns>
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public static Item [] DiffInt(int[] ArrayA, int[] ArrayB) {
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// The A-Version of the data (original data) to be compared.
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DiffData DataA = new DiffData(ArrayA);
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// The B-Version of the data (modified data) to be compared.
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DiffData DataB = new DiffData(ArrayB);
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LCS(DataA, 0, DataA.Length, DataB, 0, DataB.Length);
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return CreateDiffs(DataA, DataB);
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} // Diff
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/// <summary>
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/// This function converts all textlines of the text into unique numbers for every unique textline
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/// so further work can work only with simple numbers.
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/// </summary>
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/// <param name="aText">the input text</param>
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/// <param name="h">This extern initialized hashtable is used for storing all ever used textlines.</param>
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/// <param name="trimSpace">ignore leading and trailing space characters</param>
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/// <returns>a array of integers.</returns>
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private static int[] DiffCodes(string aText, Hashtable h, bool trimSpace, bool ignoreSpace, bool ignoreCase) {
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// get all codes of the text
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string []Lines;
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int []Codes;
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int lastUsedCode = h.Count;
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object aCode;
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string s;
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// strip off all cr, only use lf as textline separator.
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aText = aText.Replace("\r", "");
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Lines = aText.Split('\n');
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Codes = new int[Lines.Length];
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for (int i = 0; i < Lines.Length; ++i) {
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s = Lines[i];
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if (trimSpace)
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s = s.Trim();
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if (ignoreSpace) {
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s = Regex.Replace(s, "\\s+", " "); // TO!DO: optimization: faster blank removal.
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}
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if (ignoreCase)
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s = s.ToLower();
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aCode = h[s];
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if (aCode == null) {
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lastUsedCode++;
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h[s] = lastUsedCode;
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Codes[i] = lastUsedCode;
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} else {
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Codes[i] = (int)aCode;
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} // if
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} // for
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return(Codes);
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} // DiffCodes
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/// <summary>
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/// This is the algorithm to find the Shortest Middle Snake (SMS).
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/// </summary>
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/// <param name="DataA">sequence A</param>
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/// <param name="LowerA">lower bound of the actual range in DataA</param>
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/// <param name="UpperA">upper bound of the actual range in DataA (exclusive)</param>
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/// <param name="DataB">sequence B</param>
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/// <param name="LowerB">lower bound of the actual range in DataB</param>
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/// <param name="UpperB">upper bound of the actual range in DataB (exclusive)</param>
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/// <returns>a MiddleSnakeData record containing x,y and u,v</returns>
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private static SMSRD SMS(DiffData DataA, int LowerA, int UpperA, DiffData DataB, int LowerB, int UpperB) {
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SMSRD ret;
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int MAX = DataA.Length + DataB.Length + 1;
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int DownK = LowerA - LowerB; // the k-line to start the forward search
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int UpK = UpperA - UpperB; // the k-line to start the reverse search
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int Delta = (UpperA - LowerA) - (UpperB - LowerB);
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bool oddDelta = (Delta & 1) != 0;
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/// vector for the (0,0) to (x,y) search
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int[] DownVector = new int[2* MAX + 2];
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/// vector for the (u,v) to (N,M) search
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int[] UpVector = new int[2 * MAX + 2];
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// The vectors in the publication accepts negative indexes. the vectors implemented here are 0-based
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// and are access using a specific offset: UpOffset UpVector and DownOffset for DownVektor
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int DownOffset = MAX - DownK;
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int UpOffset = MAX - UpK;
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int MaxD = ((UpperA - LowerA + UpperB - LowerB) / 2) + 1;
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// Debug.Write(2, "SMS", String.Format("Search the box: A[{0}-{1}] to B[{2}-{3}]", LowerA, UpperA, LowerB, UpperB));
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// init vectors
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DownVector[DownOffset + DownK + 1] = LowerA;
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UpVector[UpOffset + UpK - 1] = UpperA;
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for (int D = 0; D <= MaxD; D++) {
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// Extend the forward path.
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for (int k = DownK - D; k <= DownK + D; k += 2) {
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// Debug.Write(0, "SMS", "extend forward path " + k.ToString());
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// find the only or better starting point
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int x, y;
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if (k == DownK - D) {
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x = DownVector[DownOffset + k+1]; // down
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} else {
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x = DownVector[DownOffset + k-1] + 1; // a step to the right
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if ((k < DownK + D) && (DownVector[DownOffset + k+1] >= x))
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x = DownVector[DownOffset + k+1]; // down
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}
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y = x - k;
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// find the end of the furthest reaching forward D-path in diagonal k.
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while ((x < UpperA) && (y < UpperB) && (DataA.data[x] == DataB.data[y])) {
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x++; y++;
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}
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DownVector[DownOffset + k] = x;
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// overlap ?
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if (oddDelta && (UpK-D < k) && (k < UpK+D)) {
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if (UpVector[UpOffset + k] <= DownVector[DownOffset + k]) {
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ret.x = DownVector[DownOffset + k];
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ret.y = DownVector[DownOffset + k] - k;
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// ret.u = UpVector[UpOffset + k]; // 2002.09.20: no need for 2 points
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// ret.v = UpVector[UpOffset + k] - k;
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return (ret);
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} // if
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} // if
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} // for k
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// Extend the reverse path.
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for (int k = UpK - D; k <= UpK + D; k += 2) {
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// Debug.Write(0, "SMS", "extend reverse path " + k.ToString());
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// find the only or better starting point
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int x, y;
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if (k == UpK + D) {
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x = UpVector[UpOffset + k-1]; // up
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} else {
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x = UpVector[UpOffset + k+1] - 1; // left
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if ((k > UpK - D) && (UpVector[UpOffset + k-1] < x))
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x = UpVector[UpOffset + k-1]; // up
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} // if
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y = x - k;
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while ((x > LowerA) && (y > LowerB) && (DataA.data[x-1] == DataB.data[y-1])) {
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x--; y--; // diagonal
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}
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UpVector[UpOffset + k] = x;
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// overlap ?
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if (! oddDelta && (DownK-D <= k) && (k <= DownK+D)) {
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if (UpVector[UpOffset + k] <= DownVector[DownOffset + k]) {
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ret.x = DownVector[DownOffset + k];
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ret.y = DownVector[DownOffset + k] - k;
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// ret.u = UpVector[UpOffset + k]; // 2002.09.20: no need for 2 points
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// ret.v = UpVector[UpOffset + k] - k;
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return (ret);
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} // if
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} // if
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} // for k
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} // for D
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throw new ApplicationException("the algorithm should never come here.");
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} // SMS
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/// <summary>
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/// This is the divide-and-conquer implementation of the longes common-subsequence (LCS)
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/// algorithm.
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/// The published algorithm passes recursively parts of the A and B sequences.
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/// To avoid copying these arrays the lower and upper bounds are passed while the sequences stay constant.
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/// </summary>
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/// <param name="DataA">sequence A</param>
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/// <param name="LowerA">lower bound of the actual range in DataA</param>
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/// <param name="UpperA">upper bound of the actual range in DataA (exclusive)</param>
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/// <param name="DataB">sequence B</param>
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/// <param name="LowerB">lower bound of the actual range in DataB</param>
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/// <param name="UpperB">upper bound of the actual range in DataB (exclusive)</param>
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private static void LCS(DiffData DataA, int LowerA, int UpperA, DiffData DataB, int LowerB, int UpperB) {
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// Debug.Write(2, "LCS", String.Format("Analyse the box: A[{0}-{1}] to B[{2}-{3}]", LowerA, UpperA, LowerB, UpperB));
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// Fast walkthrough equal lines at the start
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while (LowerA < UpperA && LowerB < UpperB && DataA.data[LowerA] == DataB.data[LowerB]) {
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LowerA++; LowerB++;
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}
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// Fast walkthrough equal lines at the end
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while (LowerA < UpperA && LowerB < UpperB && DataA.data[UpperA-1] == DataB.data[UpperB-1]) {
|
|
--UpperA; --UpperB;
|
|
}
|
|
|
|
if (LowerA == UpperA) {
|
|
// mark as inserted lines.
|
|
while (LowerB < UpperB)
|
|
DataB.modified[LowerB++] = true;
|
|
|
|
} else if (LowerB == UpperB) {
|
|
// mark as deleted lines.
|
|
while (LowerA < UpperA)
|
|
DataA.modified[LowerA++] = true;
|
|
|
|
} else {
|
|
// Find the middle snakea and length of an optimal path for A and B
|
|
SMSRD smsrd = SMS(DataA, LowerA, UpperA, DataB, LowerB, UpperB);
|
|
// Debug.Write(2, "MiddleSnakeData", String.Format("{0},{1}", smsrd.x, smsrd.y));
|
|
|
|
// The path is from LowerX to (x,y) and (x,y) ot UpperX
|
|
LCS(DataA, LowerA, smsrd.x, DataB, LowerB, smsrd.y);
|
|
LCS(DataA, smsrd.x, UpperA, DataB, smsrd.y, UpperB); // 2002.09.20: no need for 2 points
|
|
}
|
|
} // LCS()
|
|
|
|
|
|
/// <summary>Scan the tables of which lines are inserted and deleted,
|
|
/// producing an edit script in forward order.
|
|
/// </summary>
|
|
/// dynamic array
|
|
private static Item[] CreateDiffs(DiffData DataA, DiffData DataB) {
|
|
ArrayList a = new ArrayList();
|
|
Item aItem;
|
|
Item []result;
|
|
|
|
int StartA, StartB;
|
|
int LineA, LineB;
|
|
|
|
LineA = 0;
|
|
LineB = 0;
|
|
while (LineA < DataA.Length || LineB < DataB.Length) {
|
|
if ((LineA < DataA.Length) && (! DataA.modified[LineA])
|
|
&& (LineB < DataB.Length) && (! DataB.modified[LineB])) {
|
|
// equal lines
|
|
LineA++;
|
|
LineB++;
|
|
|
|
} else {
|
|
// maybe deleted and/or inserted lines
|
|
StartA = LineA;
|
|
StartB = LineB;
|
|
|
|
while (LineA < DataA.Length && (LineB >= DataB.Length || DataA.modified[LineA]))
|
|
// while (LineA < DataA.Length && DataA.modified[LineA])
|
|
LineA++;
|
|
|
|
while (LineB < DataB.Length && (LineA >= DataA.Length || DataB.modified[LineB]))
|
|
// while (LineB < DataB.Length && DataB.modified[LineB])
|
|
LineB++;
|
|
|
|
if ((StartA < LineA) || (StartB < LineB)) {
|
|
// store a new difference-item
|
|
aItem = new Item();
|
|
aItem.StartA = StartA;
|
|
aItem.StartB = StartB;
|
|
aItem.deletedA = LineA - StartA;
|
|
aItem.insertedB = LineB - StartB;
|
|
a.Add(aItem);
|
|
} // if
|
|
} // if
|
|
} // while
|
|
|
|
result = new Item[a.Count];
|
|
a.CopyTo(result);
|
|
|
|
return (result);
|
|
}
|
|
|
|
} // class Diff
|
|
|
|
/// <summary>Data on one input file being compared.
|
|
/// </summary>
|
|
internal class DiffData {
|
|
|
|
/// <summary>Number of elements (lines).</summary>
|
|
internal int Length;
|
|
|
|
/// <summary>Buffer of numbers that will be compared.</summary>
|
|
internal int[] data;
|
|
|
|
/// <summary>
|
|
/// Array of booleans that flag for modified data.
|
|
/// This is the result of the diff.
|
|
/// This means deletedA in the first Data or inserted in the second Data.
|
|
/// </summary>
|
|
internal bool[] modified;
|
|
|
|
/// <summary>
|
|
/// Initialize the Diff-Data buffer.
|
|
/// </summary>
|
|
/// <param name="data">reference to the buffer</param>
|
|
internal DiffData(int[] initData) {
|
|
data = initData;
|
|
Length = initData.Length;
|
|
modified = new bool[Length + 2];
|
|
} // DiffData
|
|
|
|
} // class DiffData
|
|
|
|
} // namespace |